Target intelligence / Profile preview

Lysine-specific demethylase 5D (KDM5D)

Target
KDM5D
Molecular classification
Enzyme, Histone demethylase, Jumonji C (JmjC) domain-containing protein, Chromatin modifier, Histone modification
01

Overview

Lysine-specific demethylase 5D (KDM5D) is a Y chromosome-encoded enzyme of the KDM5/JARID1 family, responsible for *demethylating di- and trimethylated lysine 4 on histone H3 (H3K4me2/3)*, a key epigenetic mark associated with active transcription[1]. KDM5D regulates gene expression, chromatin structure, and cell fate decisions by modifying histone methylation and interacting with other chromatin regulators including histone deacetylases[1]. While its primary role is in epigenetic regulation within the nucleus, KDM5D can also interact with non-histone proteins such as the kinase p38α, where it demethylates K165 and inactivates downstream signaling to suppress tumor progression[2]. KDM5D is implicated in cancer by influencing cell proliferation, migration, chemoresistance (notably to platinum agents), and may serve as both a tumor suppressor or oncogene depending on cellular context[2][3][4]. Due to its diverse roles and selective expression in male tissues, KDM5D is under investigation as a potential therapeutic target and as a biomarker in oncology, particularly for sex-specific differences in disease[2][3][4].

Other names
Lysine demethylase 5DJARID1DSMCYHYHYAKIAA0234Histocompatibility Y antigenHistone demethylase JARID1DJumonji/ARID domain-containing protein 1DProtein SmcY[histone H3]-trimethyl-L-lysine(4) demethylase 5Depididymis secretory sperm binding proteinJumonji, AT rich interactive domain 1D (RBP2-like)Selected mouse cDNA on Y, human homolog of
02

Mechanism of action

Inhibitors of KDM5D would block demethylase activity, increasing levels of H3K4 methylation, influencing gene expression. Disruption of KDM5D-mediated demethylation sensitizes cancer cells to DNA-damaging agents (e.g., cisplatin), possibly by preventing the emergence of drug-tolerant persister cells[3]. Modulation of non-histone protein methylation, such as demethylation of p38α at K165, affecting downstream signaling pathways[2].

03

Biological functions

Epigenetic regulation of gene expressionHistone lysine demethylation (especially H3K4me2/3)Transcriptional regulation (repression and activation)Cell cycle regulationDNA replication and repairChromatin remodelingModulation of cell proliferation and migration
04

Disease associations

Cancer (oncogenic and tumor suppressive roles, context-dependent)Chemoresistance (e.g., platinum resistance in head and neck squamous cell carcinoma)Other (disease modification through epigenetic regulation)
05

Safety considerations

Lack of isoform-selective KDM5D inhibitors increases risk of off-target effects on other KDM5 family members[1].Epigenetic drugs may cause broad transcriptional changes, raising potential for toxicity or developmental side effects[1].Sex-specific roles (expression in male tissues due to Y chromosome localization) may limit therapeutic targeting in women or lead to gender-specific effects[4].
06

Interacting drugs

No specific clinical drugs directly targeting KDM5D as of September 2025, but related agents (such as pan-KDM5 inhibitors) and investigational compounds may interact with the broader KDM5 family[2][3].

1 more in the full profile.

07

Biomarkers

Expression levels of KDM5D as a prognostic or predictive biomarker, particularly in cancer types with sex differences or platinum resistance[2][3][4].KDM5D/AURKB axis involvement for monitoring chemoresistance in cancer[3].

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