Target intelligence / Profile preview

Lysine-specific demethylase 6 family (KDM6)

Target
KDM6
Molecular classification
Enzyme, Histone demethylase, JmjC domain-containing protein, Oxidoreductase, Dioxygenase, Chromatin regulator
01

Overview

The Lysine-specific demethylase 6 (KDM6) family consists of JmjC domain-containing enzymes, primarily KDM6A (UTX), KDM6B (JMJD3), and KDM6C (UTY), that specifically catalyze the removal of repressive methyl marks from lysine 27 of histone H3 (H3K27me2/3). By removing these marks, KDM6 proteins facilitate chromatin opening and the activation of genes essential for embryonic development, cell lineage commitment, and the regulation of inflammatory responses (1.2.1, 1.3.3). These enzymes are frequently dysregulated in various pathologies, including hematologic malignancies and solid tumors, where they can act as either oncogenes or tumor suppressors depending on the specific cellular and genetic context (1.2.2, 1.4.2). In addition to cancer, the KDM6 family plays a critical role in mediating pro-inflammatory gene expression in autoimmune conditions such as rheumatoid arthritis and multiple sclerosis (1.2.3). Therapeutic strategies targeting this family involve small-molecule inhibitors like GSK-J4, which aim to restore repressive H3K27me3 marks on oncogenic or inflammatory promoters (1.1.1, 1.1.2). However, the clinical application of these inhibitors faces challenges regarding target selectivity and the potential for broad, off-target epigenetic toxicity (1.2.1, 1.2.2).

Other names
KDM6 subfamilyH3K27 demethylase familyJmjC domain-containing histone demethylase 6 familyUTX/JMJD3 family
02

Mechanism of action

Inhibition of the JmjC catalytic domain to prevent the demethylation of di- and tri-methylated lysine 27 on histone H3 (H3K27me2/3), thereby maintaining gene repression.

03

Biological functions

Histone modificationGene expression regulationCell differentiationEmbryonic developmentImmune responseCell cycle regulationSenescenceChromatin remodeling
04

Disease associations

CancerInflammationAutoimmune diseaseNeurodegenerative diseaseDevelopmental disorderRheumatoid arthritisSystemic lupus erythematosusMultiple sclerosisT-cell acute lymphoblastic leukemiaKabuki syndrome
05

Safety considerations

Off-target inhibition of other JmjC-containing demethylasesBroad and unintended epigenetic alterationsContext-dependent dual roles as oncogenes or tumor suppressorsPotential for systemic cytotoxicityDevelopment of drug resistance under hypoxic conditions
06

Interacting drugs

GSK-J1

3 more in the full profile.

07

Biomarkers

H3K27me3 levelsKDM6A expression levelKDM6B expression levelKDM6A mutation statusTNF-alpha levelsIL-6 levels

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