Target intelligence / Profile preview

Lysine-specific histone demethylase 1A–CoREST complex (LSD1–CoREST complex)

Target
LSD1–CoREST complex
Molecular classification
Enzyme complex, Histone demethylase complex, Chromatin regulator, Epigenetic modifier, Histone modification
01

Overview

The Lysine-specific histone demethylase 1A–CoREST complex (LSD1–CoREST complex) is a multi-protein epigenetic regulator comprising the enzyme LSD1 (KDM1A), the corepressor protein CoREST (REST corepressor 1, RCOR1), and often additional components such as HDAC1/2. LSD1 functions as a flavin adenine dinucleotide (FAD)-dependent histone demethylase, specifically removing methyl groups from mono- and dimethylated lysine 4 on histone H3 (H3K4me1/2)—a mark associated with active gene transcription. CoREST is essential for enabling LSD1 to demethylate nucleosomal histones rather than just free histone peptides, as it mediates binding to both DNA and histones within the nucleosome[2][5][6]. The complex is critical for transcriptional repression, cell differentiation, and maintenance of cellular identity. Structural studies show a flexible, bi-lobed architecture, accommodating the activities of both LSD1 and associated histone deacetylases (HDAC1/2) within the same complex, providing coupled demethylase and deacetylase activities for chromatin remodeling[1][5][6]. Dysregulation and overexpression of the LSD1–CoREST complex have been implicated in various cancers and are being actively targeted by small-molecule inhibitors currently in clinical development[3][6].

Other names
KDM1A–CoREST complexLSD1/CoRESTLSD1:RCOR1 complexKDM1A–RCOR1 complex
02

Mechanism of action

LSD1 inhibition blocks demethylation of H3K4, leading to reactivation of silenced genes including differentiation and tumor suppressor genes[6][3]. Disruption of the LSD1–CoREST complex impairs its chromatin binding and epigenetic repression functions[2][3]. Dual inhibition within the complex (e.g., targeting both LSD1 and HDAC1) may affect both methylation and acetylation status[1][6].

03

Biological functions

Epigenetic regulationTranscriptional repressionCell fate determinationChromatin remodelingCell differentiation
04

Disease associations

CancerNeurodegenerative diseaseOther (based on involvement in REST/NRSF-regulated neuronal gene expression and cell differentiation)
05

Safety considerations

On-target toxicity (hematological, neuropsychiatric, and differentiation effects)Potential for broad gene expression changes due to disruption of global epigenetic regulation[6]Off-target effects due to inhibition of similar FAD-dependent enzymes
06

Interacting drugs

Tranylcypromine (and derivatives, e.g., ORY-1001, GSK2879552)

3 more in the full profile.

07

Biomarkers

LSD1 (KDM1A) expression levels in tumor tissue (predicts response to LSD1 inhibitors)[3]H3K4 methylation statusREST/CoREST signatures in some neural and cancer contexts

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