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Macroautophagy pathway components

Molecular classification
Enzyme, Receptor, Transcription factor, Other
01

Overview

Macroautophagy is a fundamental, evolutionarily conserved cellular process responsible for the degradation and recycling of cytoplasmic components, including misfolded proteins and damaged organelles (NIH, https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6424777/). This pathway involves the formation of double-membrane vesicles called autophagosomes that engulf cellular cargo and subsequently fuse with lysosomes for enzymatic breakdown (ResearchGate, https://www.researchgate.net/publication/384814411_Autophagy_Mechanism_and_Clinical_Potential). The process is regulated by a complex network of proteins, including the ULK1 initiation complex, the VPS34 nucleation complex, and various autophagy-related (ATG) proteins (Frontiers, https://www.frontiersin.org/journals/pharmacology/articles/10.3389/fphar.2025.1534211/full). Macroautophagy plays a critical role in maintaining cellular homeostasis and responding to nutrient stress, and its dysfunction is linked to a wide range of pathologies such as neurodegenerative diseases, cancer, and infections (NIH, https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6424777/). In therapeutic contexts, the pathway is targeted either to enhance its protective recycling function (e.g., using mTOR inhibitors like rapamycin) or to inhibit its survival-promoting effects in established tumors (e.g., using lysosomal inhibitors like hydroxychloroquine) (MDPI, https://www.mdpi.com/1422-0067/25/20/10965).

Other names
Autophagy pathwayMacroautophagy machineryATG systemAutophagy-lysosomal pathway
02

Mechanism of action

mTORC1 inhibition (autophagy induction), Lysosomal acidification inhibition (autophagy inhibition), ULK1 kinase inhibition, VPS34 kinase inhibition, AMPK activation (autophagy induction), and v-ATPase inhibition (autophagy inhibition)

03

Biological functions

AutophagyCell deathSignal transductionMetabolismImmune responseProteolysisHomeostasis
04

Disease associations

CancerNeurodegenerative diseaseInfectionInflammationCardiovascular diseaseMetabolic disease
05

Safety considerations

Dual role in cancer (tumor suppression vs. promotion)Immunosuppression (mTOR inhibitors)Retinal toxicity (Hydroxychloroquine)Potential for excessive cell death (autophagic cell death)Off-target effects due to pathway crosstalk
06

Interacting drugs

Rapamycin

10 more in the full profile.

07

Biomarkers

Microtubule-associated protein 1 light chain 3B-II (LC3-II)Sequestosome 1 (p62)Beclin 1Autophagy-related protein 5 (ATG5)Autophagy-related protein 7 (ATG7)

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