Target intelligence / Profile preview

Menin–KMT2A protein–protein interface

Molecular classification
Protein–protein interaction, Histone modification (via KMT2A/MLL1), Epigenetic regulator, Transcriptional cofactor
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Overview

The **menin–KMT2A protein–protein interface** refers to the highly specific binding between the scaffold protein menin (encoded by the MEN1 gene) and the N-terminal region of KMT2A (lysine methyltransferase 2A, also known as MLL1). This interaction is essential for the oncogenic function of KMT2A fusion proteins in acute leukemias[1][3][5]. Menin acts as a critical cofactor, enabling KMT2A-driven complexes to activate expression of leukemogenic target genes such as HOXA9 and MEIS1, thereby sustaining the leukemic phenotype. Disrupting this interface impairs the assembly and function of these oncogenic transcriptional complexes, providing a rationale for the development of small-molecule menin–KMT2A inhibitors as targeted cancer therapeutics, especially in KMT2A-rearranged and NPM1-mutant AML[3][5][7][1]. This protein–protein interface is now recognized as a validated **therapeutic target** in oncology, particularly for MLL-rearranged leukemias, with several inhibitors advancing through clinical trials.

Other names
Menin–MLL1 protein–protein interfaceMenin–MLL protein–protein interactionMenin–KMT2A/MLL interface
02

Mechanism of action

Inhibition of the menin–KMT2A protein–protein interaction, disrupting oncogenic transcriptional complexes in leukemia Downregulation of aberrant HOX/MEIS1 gene expression and leukemic cell self-renewal Induction of differentiation and inhibition of proliferation in leukemia cells

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Biological functions

Regulation of gene transcriptionEpigenetic modification (histone methylation)HematopoiesisCell proliferationChromatin remodelingMaintenance of developmental gene expression
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Disease associations

CancerLeukemia (particularly acute myeloid leukemia (AML) with KMT2A rearrangement)Neurodevelopmental syndrome (general role of KMT2A/menin, not specific to interface)
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Safety considerations

Off-target epigenetic effects (potential impact on global gene regulation)Risk of hematologic toxicities (myelosuppression, cytopenias)Tumor lysis syndrome in patients with high disease burdenPossible effects on normal hematopoiesis
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Interacting drugs

Revumenib (SNDX-5613)

4 more in the full profile.

07

Biomarkers

KMT2A (MLL1) rearrangement/fusion (KMT2Ar) statusHOXA9 and MEIS1 expression levelsNPM1 mutation (NPM1mut AML as emerging indication)

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