Target intelligence / Profile preview

Menin–Lysine methyltransferase 2A complex (Menin–KMT2A)

Target
Menin–KMT2A
Molecular classification
Transcription factor complex, Epigenetic regulator, Histone modification complex, Scaffold protein complex
01

Overview

The Menin–Lysine methyltransferase 2A (KMT2A) complex is a critical epigenetic regulatory assembly composed of the scaffold protein menin (encoded by the MEN1 gene) and the histone methyltransferase KMT2A (also known as MLL1). In healthy cells, this complex regulates the transcription of genes essential for normal hematopoiesis and embryonic development, such as the HOX gene clusters. However, in specific subsets of acute leukemia, including those with KMT2A rearrangements (KMT2Ar) or NPM1 mutations (NPM1m), the interaction between menin and KMT2A becomes a central driver of oncogenesis. The complex tethers leukemogenic fusion proteins to chromatin, leading to the constitutive overexpression of HOXA9 and MEIS1, which blocks myeloid differentiation and promotes uncontrolled cell proliferation. Therapeutic targeting of this complex involves small-molecule inhibitors that disrupt the protein-protein interaction between menin and KMT2A. This disruption results in the downregulation of the leukemic gene expression program, inducing differentiation and apoptosis of the malignant cells. Clinical candidates like revumenib and ziftomenib have shown significant efficacy in relapsed or refractory acute leukemias, with revumenib receiving FDA approval for these indications.

Other names
Menin–MLL complexMenin–MLL1 complexMenin–Lysine methyltransferase 2A complexMenin–KMT2A interaction
02

Mechanism of action

Disruption of the protein-protein interaction between menin and KMT2A (or KMT2A-fusion proteins), preventing the anchoring of the KMT2A complex to chromatin and leading to the downregulation of leukemogenic genes such as HOXA9 and MEIS1.

03

Biological functions

Regulation of hematopoiesisGene expression regulationCell proliferationMyeloid differentiationEmbryonic development
04

Disease associations

Acute Myeloid LeukemiaAcute Lymphoblastic LeukemiaKMT2A-rearranged leukemiaNPM1-mutated leukemiaNUP98-rearranged leukemia
05

Safety considerations

Differentiation syndromeQTc prolongationCytopeniaFebrile neutropeniaAcquired resistance mutations in the MEN1 gene
06

Interacting drugs

Revumenib (SNDX-5613)

5 more in the full profile.

07

Biomarkers

KMT2A rearrangement (KMT2Ar)NPM1 mutation (NPM1m)NUP98 rearrangementHOXA gene expressionMEIS1 gene expression

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