Target intelligence / Profile preview

Methyltransferase-like protein 16 (METTL16)

Target
METTL16
Molecular classification
Enzyme, RNA methyltransferase, S-adenosylmethionine (SAM)-dependent methyltransferase
01

Overview

Methyltransferase-like protein 16 (METTL16) is a SAM-dependent RNA methyltransferase that catalyzes N6-methyladenosine (m6A) modification on specific RNA substrates, most notably at position 43 of the U6 small nuclear RNA (snRNA) and in stem-loop structures within MAT2A pre-mRNA[1][2][6]. It is part of the class I SAM-methyltransferase family and is critical for regulating RNA processing events such as splicing and stability, as well as maintaining cellular SAM homeostasis through feedback regulation of MAT2A expression[1][4]. METTL16 displays unique substrate specificity, recognizing a nine-nucleotide consensus and RNA secondary structure, distinguishing it from other m6A writers like METTL3/14[4]. The enzyme has additional roles in translation, nuclear processes, and potential interaction with long non-coding RNAs such as MALAT1, indicating broader impacts on gene expression and RNA metabolism[1][2][3]. Currently, METTL16 is under investigation as a possible therapeutic target, especially in the context of cancer and metabolic regulation, but no clinically approved inhibitors are established[1][4][3].

Other names
Methyltransferase-like protein 16Methyltransferase 16, RNA N6-adenosineMETT10DMGC3329Methyltransferase 10 domain-containing proteinN6-methyladenosine methyltransferaseU6 small nuclear RNA (adenine-(43)-N(6))-methyltransferaseRNA N(6)-adenosine-methyltransferase METTL16Methyltransferase 10 domain containing
02

Mechanism of action

Drugs targeting METTL16 would be expected to inhibit its RNA methyltransferase activity, thereby blocking N6-methyladenosine (m6A) modification of target RNAs

03

Biological functions

RNA modification (N6-methyladenosine (m6A) methylation of RNA)Regulation of mRNA and snRNA splicingFeedback regulation of cellular S-adenosylmethionine (SAM) levelsRegulation of gene expression and RNA stabilityInteracts with noncoding RNAs, affecting translation and RNA processing
04

Disease associations

Cancer (various studies link m6A and related enzymes to cancer biology and progression)Other (potential involvement in metabolic regulation and chromatin modification; emerging roles in disease still being explored)
05

Safety considerations

Targeting a central RNA modification enzyme may cause broad effects on RNA metabolism and cellular methylation homeostasis, raising the risk of unintended alterations in gene expression and cellular functionDisruption of global methylation balance may result in metabolic or epigenetic dysregulation
06

Interacting drugs

None currently approved or established; METTL16 is under investigation as a possible therapeutic target, but specific direct inhibitors or drugs are not widely reported in current literature
07

Biomarkers

N6-methyladenosine (m6A) levels in U6 snRNA or MAT2A mRNA may serve as pharmacodynamic biomarkers of METTL16 activityMETTL16 expression or m6A levels in specific RNAs could emerge as biomarkers for certain diseases in future research

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