Target intelligence / Profile preview

MYC proto-oncogene promoter genomic DNA (MYC promoter)

Target
MYC promoter
Molecular classification
Genomic DNA, G-quadruplex structure, Regulatory element
01

Overview

The MYC proto-oncogene promoter genomic DNA is a vital regulatory segment responsible for controlling the expression of the MYC transcription factor, a master regulator of cellular processes including growth, metabolism, and apoptosis (Brooks et al., 2014, PubMed: 24558120). A specific region within the promoter, known as the Nuclease Hypersensitive Element III1 (NHE III1), is capable of forming G-quadruplex (G4) structures—four-stranded DNA arrangements that naturally inhibit transcription by blocking RNA polymerase access (Siddiqui-Jain et al., 2002, PubMed: 12242335). In many cancers, MYC is constitutively overexpressed, driving uncontrolled malignancy, yet the MYC protein itself lacks traditional small-molecule binding pockets, making it difficult to target directly (Duffy et al., 2021, PubMed: 33806431). Consequently, the MYC promoter DNA has become a high-priority therapeutic target, where small molecules are designed to stabilize the G4 structure to silence gene expression (Ou et al., 2008, PubMed: 18331108). Therapeutic intervention at this level offers a way to bypass the undruggable nature of the protein and selectively reduce oncogenic signaling in MYC-dependent tumors. This approach is particularly relevant in hematological malignancies and solid tumors where MYC amplification or translocation is a primary driver of disease progression.

Other names
c-Myc promoterMYC NHE III1MYC G-quadruplexMYC P1/P2 promoterNuclease Hypersensitive Element III1
02

Mechanism of action

Stabilization of G-quadruplex (G4) structures within the Nuclease Hypersensitive Element III1 (NHE III1) of the promoter region to sterically hinder the transcriptional machinery and downregulate MYC mRNA synthesis.

03

Biological functions

Transcription regulationCell proliferationCell cycle controlMetabolism regulationApoptosis regulation
04

Disease associations

CancerBurkitt lymphomaBreast cancerProstate cancerColorectal cancerHematological malignancy
05

Safety considerations

Off-target binding to other G-quadruplex-forming regions in the genomePotential genotoxicity and genomic instabilityInhibition of MYC in normal rapidly dividing cells (e.g., bone marrow, GI tract)Poor pharmacological properties and bioavailability of many G4 ligands
06

Interacting drugs

TMPyP4

5 more in the full profile.

07

Biomarkers

MYC mRNA levelsMYC protein expressionG-quadruplex formation (BG4 antibody staining)NHE III1 methylation status

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