Target intelligence / Profile preview

Mycobacterium avium subspecies paratuberculosis DNA-directed RNA polymerase (RNAP) (MAP RNAP)

Target
MAP RNAP
Molecular classification
Enzyme, Transferase, DNA-directed RNA polymerase
01

Overview

Mycobacterium avium subspecies paratuberculosis (MAP) DNA-directed RNA polymerase is an essential enzyme complex that catalyzes the transcription of bacterial DNA into messenger RNA (UniProt: P0A5I4). This enzyme is a critical component of the bacterial gene expression machinery, making it a primary target for antimicrobial therapy (PubMed: 16238959). MAP is the causative agent of Johne's disease, a chronic granulomatous enteritis in ruminants, and is also implicated in the etiology of Crohn's disease in humans (PubMed: 25038248). The enzyme's beta subunit, encoded by the rpoB gene, contains the highly conserved binding site for rifamycin-class antibiotics, including rifabutin and rifampicin (PubChem: CID 5462350). These drugs function by binding to the polymerase and sterically blocking the path of the growing RNA chain, effectively halting protein synthesis and bacterial replication (PubMed: 11514513). Because MAP is an intracellular pathogen that grows extremely slowly, targeting its transcription process is a key strategy in multi-drug regimens like RHB-104 (ClinicalTrials.gov: NCT01951326). Clinical efficacy is often monitored through the detection of MAP-specific DNA sequences, such as IS900, or host immune responses (PubMed: 10944757). However, the potential for rapid development of resistance via rpoB mutations necessitates the use of combination therapies to ensure long-term suppression of the pathogen (PubMed: 15933035).

Other names
MAP RNA polymeraseDNA-dependent RNA polymeraserpoBDNA-directed RNA polymerase subunit betaMAP_1370
02

Mechanism of action

Inhibition of RNA synthesis by binding to the beta subunit of the RNA polymerase, which sterically blocks the elongation of the nascent RNA transcript.

03

Biological functions

TranscriptionRNA synthesisGene expression
04

Disease associations

InfectionJohne's diseaseCrohn's disease
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Safety considerations

Development of antimicrobial resistance (rpoB mutations)HepatotoxicityDrug-drug interactions via CYP3A4 inductionUveitis (associated with high-dose rifabutin)
06

Interacting drugs

Rifabutin

3 more in the full profile.

07

Biomarkers

IS900 DNA sequenceMAP-specific antibodiesInterferon-gamma release

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