Target intelligence / Profile preview

Ornithine decarboxylase (Trypanosoma brucei) (ODC)

Target
ODC
Molecular classification
Enzyme, Decarboxylase, Pyridoxal 5'-phosphate (PLP)-dependent enzyme, Homodimeric protein
01

Overview

Ornithine decarboxylase in Trypanosoma brucei is a homodimeric, pyridoxal 5'-phosphate-dependent enzyme that catalyzes the conversion of ornithine to putrescine—the initial, rate-limiting step in polyamine biosynthesis. This pathway is vital for parasite cell division and survival, making ODC an attractive drug target for African sleeping sickness. The enzyme is characterized by unique structural features, including a β/α-barrel N-terminal domain and a Greek key β-barrel C-terminal domain, and forms a tight dimeric interface. ODC's activity is essential for maintaining trypanothione, which protects the parasite from oxidative stress. Alpha-difluoromethylornithine (DFMO), a suicide inhibitor of ODC, is clinically approved and effective against T. brucei gambiense and is recommended together with nifurtimox for late-stage infection. The enzyme differs from its mammalian counterpart in regulatory mechanisms and turnover, supporting the development of selective parasite-specific inhibitors.

Other names
ODCOrnithine decarboxylaseTrypanosoma brucei ODCTbODCTrypanosoma brucei gambiense ornithine decarboxylase
02

Mechanism of action

Irreversible inhibition of ODC enzymatic activity, leading to depletion of polyamine and trypanothione pools, arresting cell growth, and causing rapid parasite death; DFMO acts as a suicide inhibitor, forming a covalent bond in the active site

03

Biological functions

Catalyzes the decarboxylation of ornithine to form putrescine, the first step in polyamine biosynthesisRegulates polyamine metabolic pathway, essential for cell growth and division in Trypanosoma bruceiMaintaining trypanothione levels, influencing parasite redox balance and survival
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Disease associations

InfectionHuman African trypanosomiasis (sleeping sickness)
05

Safety considerations

DFMO has limited efficacy against one Trypanosoma brucei subspecies (gambiense); less effective for rhodesiense typePoor pharmacokinetics for DFMO require high doses and prolonged treatmentPossible host ODC inhibition can lead to unwanted polyamine depletion and off-target toxicityResistance via mutation or upregulation of alternative metabolic enzymes is possible
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Interacting drugs

Alpha-difluoromethylornithine (DFMO, also called eflornithine)

2 more in the full profile.

07

Biomarkers

Polyamine levels (such as putrescine, spermidine, and trypanothione) in parasite cells can indicate target engagement and efficacyODC expression/activity in Trypanosoma bruceiNo widely accepted blood biomarkers for patient selection

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