Target intelligence / Profile preview

Penicillin-binding protein 2 and Penicillin-binding protein 3 (PBP2 and PBP3)

Target
PBP2 and PBP3
Molecular classification
Enzyme, Transpeptidase, High-molecular-weight penicillin-binding protein (class B for PBP2, class B for PBP3)
01

Overview

Penicillin-binding protein 2 and penicillin-binding protein 3 are essential bacterial enzymes located in the cell membrane, classified as high-molecular-weight transpeptidases (class B PBPs), responsible for critical steps in peptidoglycan synthesis and cell wall cross-linking in most bacteria. These targets are the primary molecular site of action for β-lactam antibiotics, which inhibit their enzyme activity by covalently binding to an active-site serine residue, thereby preventing cell wall assembly and leading to bacterial lysis. PBP2 is particularly important in maintaining the rod shape of Gram-negative bacteria, while PBP3 catalyzes cross-linking during cell division. Resistance often arises via mutations in these proteins, which reduce binding affinity for β-lactams without compromising essential bacterial functions. Both PBP2 and PBP3 are therefore considered validated and high-value therapeutic targets for antibacterial drug design and are integral to efforts in combating drug-resistant bacterial infections.

Other names
PBP2Penicillin-binding protein 2PBP3Penicillin-binding protein 3dd-transpeptidase (functional name, sometimes used)
02

Mechanism of action

Covalent binding of β-lactam antibiotics to the active site serine of PBP2/PBP3, inhibiting their transpeptidase activity and blocking cell wall cross-linking, leading to bacterial lysis and death

03

Biological functions

Peptidoglycan biosynthesisCell wall synthesisCross-linking of bacterial cell wallMaintenance of cell shape and integrity
04

Disease associations

Infection (key role in bacterial viability and cell wall synthesis, thus central in infectious diseases caused by bacteria such as Pseudomonas aeruginosa, Neisseria gonorrhoeae, and many others)
05

Safety considerations

Emergence of resistance (especially due to mutations in PBP2/PBP3, limiting efficacy of β-lactams)Cross-resistance with other classes of β-lactamsAllergic reactions to β-lactam antibiotics (not a property of the target itself, but a clinical consideration)
06

Interacting drugs

Penicillin

7 more in the full profile.

07

Biomarkers

Presence of mutated or resistant PBP2 (as in penicillin-resistant Neisseria gonorrhoeae)PBP2/PBP3 expression level (used in some laboratory diagnostics of β-lactam resistance)

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