Target intelligence / Profile preview

PHD finger protein 13 (PHF13)

Target
PHF13
Molecular classification
Epigenetic reader (H3K4me2/3 reader protein), Chromatin-associated protein, Transcriptional co-regulator, Plant homeodomain (PHD) finger protein
01

Overview

PHF13 is a conserved chromatin regulatory protein containing a plant homeodomain (PHD) finger, which recognizes methylated lysine 4 on histone H3 (H3K4me2/3), allowing it to serve as an epigenetic reader and transcriptional co-regulator[1][3][4][5]. PHF13 modulates chromatin structure through multivalent interactions with DNA, histones, and other chromatin-associated complexes such as Polycomb repressive complex 2 (PRC2) and RNA Polymerase II[1][3][4]. It regulates key cellular processes including DNA repair, cell division, and differentiation, mainly through modulating gene transcription and chromatin compaction[1][2][3][4][6]. Aberrant expression of PHF13 has been implicated in oncogenesis, particularly promoting epithelial–mesenchymal transition (EMT)-like phenotypes and adverse cancer prognosis[1][4][6]. PHF13 can oligomerize through both ordered and disordered protein regions, impacting its chromatin affinity and the spatial organization of genome architecture[1][2]. Deficiency or overexpression of PHF13 leads to significant effects on cellular homeostasis, genome integrity, and development[1]. As of now, there are no direct small molecule modulators or approved drugs targeting PHF13[1][6].

Other names
SPOC1 (Survival time-associated PHD finger protein in ovarian cancer 1)MGC43399PHF5PHD zinc finger protein PHF5survival time-associated PHD protein in ovarian cancersurvival time-associated PHD finger protein in ovarian cancer 1
02

Mechanism of action

Not applicable (no current drugs directly targeting PHF13); potential mechanisms could involve disruption of its chromatin association, inhibition of histone binding, or modulation of its interactions with PRC2/RNA Polymerase II

03

Biological functions

Chromatin structure modulation/compactionTranscriptional regulation/co-activationDNA damage response and DNA repairRegulation of cell cycle progression/divisionCellular differentiation
04

Disease associations

Cancer (especially ovarian cancer and poor prognosis marker, epithelial–mesenchymal transition)Chromosome 1p36 deletion syndrome
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Safety considerations

Targeting PHF13 may carry risks associated with chromatin architecture disruption, genome instability, or interference with critical DNA repair mechanisms, cell division, and differentiationIn mouse models, PHF13 knockout leads to embryonic lethality and blocks stem cell differentiation
06

Interacting drugs

None directly listed in current literature; as of now, no approved or investigational drugs specifically target PHF13
07

Biomarkers

PHF13 expression levels have been linked to poor prognosis in ovarian and other cancers; could be explored as a prognostic biomarker, especially in tumors with epithelial–mesenchymal transition-like phenotypes

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