Target intelligence / Profile preview

Pyridoxal phosphate-binding protein (PLPBP)

Target
PLPBP
Molecular classification
Other (PLPBP is not an enzyme, receptor, transporter, or transcription factor; it is a regulatory, ligand-binding protein[1].), Single-domain protein, TIM-barrel fold, fold type III of PLP-dependent enzymes[1]
01

Overview

Pyridoxal phosphate-binding protein (PLPBP) is an evolutionarily conserved, single-domain regulatory protein with a fold type III structure (TIM-barrel) and no known enzymatic activity[1]. It binds the active form of vitamin B6 (pyridoxal 5'-phosphate, PLP), keeping PLP solvent-exposed for possible shuttling to PLP-dependent enzymes. PLPBP is critical in maintaining cellular PLP levels, thus ensuring activity of the many PLP-dependent enzymes that support amino acid and other core metabolic processes[1][5]. Disruption of PLPBP affects vitamin B6 homeostasis and can lead to accumulation of toxic vitamin B6 intermediates, especially pyridoxine 5'-phosphate, resulting in pleiotropic phenotypes, notably vitamin B6-dependent epilepsy in humans[3][4][5]. The protein may also play roles in cell division and cytoskeleton integrity, although these are less well characterized. PLPBP is not an enzyme or receptor and is not directly targeted by therapeutic drugs, but its function is essential in cellular vitamin B6 handling and metabolic regulation[1][5]. Deficiency or mutation may be addressed by vitamin B6 supplementation to supply the necessary cofactor for downstream enzymes[3][4].

Other names
Pyridoxal phosphate homeostasis proteinProline synthase co-transcribed bacterial homolog proteinPROSCYggS (bacterial homolog)PipY (cyanobacterial homolog)
02

Biological functions

Regulation of pyridoxal 5'-phosphate (PLP; vitamin B6) homeostasis[1][4][5]Modulation of amino acid and α-keto acid metabolism[5]Support of PLP-dependent enzymatic processes by buffering or shuttling PLP[1]Maintenance of cell division and cytoskeleton integrity/ muscle function (suggested association in cellular models)[3][4]
03

Disease associations

Neurodegenerative disease (Vitamin B6-dependent epilepsy caused by PLPBP loss-of-function mutations[3][4])Other metabolic disorders linked to amino acid and vitamin B6 metabolism disturbances[5][1]
04

Safety considerations

Loss-of-function mutations result in toxic accumulation of vitamin B6 intermediates, notably pyridoxine 5'-phosphate, leading to epilepsy and potentially other metabolic disturbances[5][1]Indirect safety issues exist if vitamin B6 homeostasis or PLP-dependent enzyme functions are perturbed
05

Biomarkers

Accumulation of pyridoxine 5'-phosphate (PNP) and perturbation of vitamin B6 metabolites in plasma or tissues can be used as biomarkers for PLPBP deficiency[5][1]Genetic testing for PLPBP mutations in cases of unexplained seizures or vitamin B6-dependent epilepsy[3][4]

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