Target intelligence / Profile preview

RNA-dependent RNA polymerase of SARS-CoV-2 (RdRp)

Target
RdRp
Molecular classification
Enzyme, Viral polymerase, RNA polymerase
01

Overview

RNA-dependent RNA polymerase of SARS-CoV-2 is an essential viral enzyme responsible for the replication and transcription of the positive-sense RNA genome of the virus[1][2][6]. The core polymerase activity resides in non-structural protein 12 (nsp12), which forms a complex with cofactors nsp7 and nsp8, greatly enhancing activity and processivity[1][2][6]. This polymerase synthesizes new viral RNAs using RNA templates, orchestrating both genome replication and subgenomic transcription necessary for viral gene expression[4]. Its central role in viral propagation makes it a prime therapeutic target—most notably for antiviral drugs such as remdesivir, which mimics nucleotide substrates and terminates RNA chain elongation, thereby suppressing viral replication[2][3]. Structural studies have elucidated the architecture of the RdRp complex and its interaction with inhibitors, providing a foundation for ongoing antiviral drug development[1][2][3][6].

Other names
RNA-dependent RNA polymerase (RdRp)nsp12non-structural protein 12SARS-CoV-2 RdRpcoronavirus polymerase
02

Mechanism of action

Inhibition of RNA chain elongation by incorporation of nucleotide analogues (e.g., remdesivir acts as a delayed chain terminator after incorporation into viral RNA); Inducing proofreading errors or mutations in the viral genome; Direct inhibition of catalytic activity of the polymerase complex

03

Biological functions

RNA genome replicationRNA transcriptionViral mRNA synthesis
04

Disease associations

Infection (COVID-19 and related coronavirus diseases)
05

Safety considerations

Potential for rapid emergence of resistance mutationsHost off-target effects from some nucleotide analogues (mitochondrial toxicity, rare but possible with some inhibitors)Uncertainty over efficacy of polymerase inhibitors in severe/late-stage disease
06

Interacting drugs

Remdesivir

4 more in the full profile.

07

Biomarkers

Viral RNA load (plasma/respiratory samples)Presence of nsp12 gene/mutations (potential for resistance surveillance)

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