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RNA polymerase basic protein 2 subunit (PB2)

Target
PB2
Molecular classification
Enzyme, Viral enzyme, RNA-dependent RNA polymerase subunit, Transcription factor (as part of the RNA polymerase complex)
01

Overview

The **RNA polymerase basic protein 2 subunit (PB2)** is one of the three subunits (PA, PB1, PB2) comprising the influenza virus RNA-dependent RNA polymerase complex[5][8]. PB2 is essential for transcription and replication of the viral RNA genome, functioning primarily as a **cap-binding protein** that recognizes and binds the 5′ cap of host pre-mRNAs. This cap-snatching mechanism allows the viral polymerase to cleave the capped ends from host RNAs, using them as primers for viral mRNA synthesis[3][5]. PB2 also plays important roles in determining host specificity and pathogenesis—certain residues, especially Lys627, affect the virus’s ability to infect different species and influence virulence[1][10]. PB2 can interact with host proteins such as importin α (for nuclear import) and the mitochondrial antiviral signaling protein MAVS (modulating immune response)[2]. Because of its essential enzymatic function and unique structural features, PB2 is a validated therapeutic target for the development of anti-influenza drugs, especially those that block its cap-binding domain and thereby inhibit viral mRNA transcription[3][4]. Key resistance-conferring mutations and adaptation markers are well studied in the PB2 sequence.

Other names
PB2Polymerase basic protein 2Influenza virus PB2
02

Mechanism of action

Inhibition of cap-binding domain to prevent cap-snatching and viral mRNA synthesis; Inhibition of RNA-dependent RNA polymerase activity; Disruption of PB2-host interactions (e.g., with importin α or MAVS)

03

Biological functions

Viral RNA transcriptionViral RNA replicationCap-snatching for viral mRNA synthesisRegulation of host immune response
04

Disease associations

Infection (specifically, influenza virus infection)
05

Safety considerations

Emergence of resistant influenza strains (e.g., mutations in PB2 reducing drug binding)Viral adaptation and increased pathogenicity through PB2 mutations
06

Interacting drugs

Favipiravir

2 more in the full profile.

07

Biomarkers

Mutations at residue Lys627 (host range, virulence marker)Mitochondrial localization sequence variants (indicative of strain-specific virulence)

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