Target intelligence / Profile preview

RNA transcription, translation and transport factor (RTRAF)

Target
RTRAF
Molecular classification
RNA-binding protein, Transcription regulator, tRNA-splicing ligase complex component, Other (RNA metabolism factor)
01

Overview

RNA transcription, translation and transport factor (RTRAF, also known as C14orf166/hCLE/CGI-99 and other aliases) is a highly conserved, ubiquitously expressed RNA-binding protein that performs key regulatory roles at the interface of transcription, RNA processing, transport, and translation[1][2][5][6][7]. RTRAF localizes to both nucleus and cytoplasm, interacting with components of the tRNA-splicing ligase complex, the human spliceosome, transcriptional machinery (notably RNA polymerase II), and proteins involved in RNA export and cytoskeletal elements[2][6]. It facilitates RNA metabolism across various steps, including positive regulation of mRNA synthesis, maturation, and cap-dependent translation, in part through nucleocytoplasmic shuttling of RNA-protein complexes[1][2][6]. Functionally, RTRAF/C14orf166 influences cell cycle progression, likely by regulating the phosphorylation of cell cycle proteins and by activating pro-oncogenic pathways (e.g., JAK2/STAT3)[2]. In the context of viral infection, especially influenza A, RTRAF is required for efficient viral RNA replication and is incorporated into virions, mediating interaction between viral and cellular systems[2][6][8]. Overexpression or dysregulation of this factor is associated with cancer, while its essential role in both normal and virus-infected cells makes it a potential biomarker and drug target[2]. There are currently no clinically approved drugs targeting RTRAF/C14orf166 directly.

Other names
C14orf166CGI-99CLEhCLERLLM1CLE7LCRP369hCLE1CLE7 homologRLL motif containing 1UPF0568 protein C14orf166
02

Mechanism of action

No approved drugs or investigational agents directly targeting RTRAF/C14orf166 are documented in major curated databases as of now; functional studies involve gene silencing or mutagenesis

03

Biological functions

Modulates RNA transcription by RNA polymerase IIRNA transport (nucleus-cytoplasm shuttling)RNA maturation and translationPre-mRNA processingtRNA splicing (via tRNA-splicing ligase complex)Regulates cell proliferation (by modulating cell cycle regulators)Facilitates viral replication for certain RNA viruses (notably influenza A)
04

Disease associations

Cancer (overexpressed in multiple cancer types, modulates cell cycle)Viral infection (required for replication of influenza A virus, involved in hepatitis C virus)Potential autoimmune activity (possible autoantigen function)
05

Safety considerations

Targeting such a central RNA processing factor may entail risks of impaired global mRNA metabolism, potential widespread impacts on cell viability, and off-target effects on normal tissue homeostasis
06

Biomarkers

Overexpression of RTRAF/C14orf166 may serve as a diagnostic or prognostic biomarker in various cancers (e.g., bladder, breast, esophageal, cervical), and as an indicator/requirement for efficient replication of certain RNA viruses (e.g., influenza A)

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