Target intelligence / Profile preview

Run and cysteine-rich domain-containing Beclin-1-interacting protein-like (RUBCNL)

Target
RUBCNL
Molecular classification
Other, Autophagy-related protein
01

Overview

Run and cysteine-rich domain-containing Beclin-1-interacting protein-like (RUBCNL, also known as PACER and other aliases) is an autophagy regulator protein that facilitates autophagosome maturation and autolysosome formation by antagonizing Rubicon (RUBCN), thereby promoting autophagic flux. It exerts dual roles by positively regulating autophagy while also protecting against TNF-induced apoptosis and necroptosis through repression of the RIPK1 kinase signaling pathway, independently of its autophagy-associated functions. It is expressed at low levels in some cancers and altered in neurodegenerative conditions (notably ALS), where both deficiency and overexpression can disrupt neuronal viability and protein aggregate clearance. RUBCNL belongs to the RUBCN (Rubicon) protein family and interacts with components of the autophagy machinery (e.g., beclin 1, PI3K/PI3KC3 complex, autophagosomal SNAREs) at the molecular level. It is not currently a direct drug target, but its regulatory roles in autophagy and cell death pathways make it a potential candidate for future translational therapeutics in cell therapy, inflammation, and neurodegeneration.

Other names
Protein associated with UVRAG as autophagy enhancerPACERC13orf18KIAA0226LFLJ21562protein Rubicon-likerubicon like autophagy regulatorKIAA0226 likeprotein RUBCNL-like
02

Mechanism of action

No clinically validated drugs or tool compounds, so no mechanisms of action for targeted drugs can be listed.

03

Biological functions

Regulation of autophagy (stimulates autophagosome maturation and autolysosome formation)Negative regulation of TNF-induced apoptosis (cell death)Negative regulation of necroptosisCellular homeostasis and proteostasisInteraction with phosphoinositides and autophagy machinery (e.g., beclin 1 complex, PI3K complex)
04

Disease associations

Cancer (low expression and promoter hypermethylation reported in cervical cancer; possible tumor suppressor function)Neurodegenerative diseases (notably amyotrophic lateral sclerosis (ALS), where levels affect SOD1 aggregation and neuron survival)Inflammatory conditions (modulates MSC survival in pro-inflammatory environments)Chronic disorders (periodontitis, chronic obstructive pulmonary disease)
05

Safety considerations

Both under- and overexpression of RUBCNL/PACER are detrimental in ALS mouse models, indicating that appropriate protein levels are essential for cell health and suggesting risks with nonspecific pharmacological modulation.
06

Biomarkers

No established biomarkers for patient selection, but reduced RUBCNL/PACER expression has been observed in ALS and cervical cancer contexts, suggesting possible future biomarker applications. Not clinically validated.

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