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SARS-CoV-2 structural protein-derived peptide-Human Leukocyte Antigen complex (SARS-CoV-2 pMHC)

Target
SARS-CoV-2 pMHC
Molecular classification
Peptide-MHC complex, Antigenic peptide, Major Histocompatibility Complex, Receptor
01

Overview

SARS-CoV-2 structural protein-derived peptides presented on HLA are critical molecular complexes that signal the presence of viral infection to the adaptive immune system. These complexes are formed when viral proteins—specifically the Spike (S), Nucleocapsid (N), Membrane (M), and Envelope (E) proteins—are proteolytically processed into short peptides and loaded onto Human Leukocyte Antigen (HLA) molecules for surface display (Source: Nature, 2021, PMID: 33055231). Once presented, these peptide-HLA (pMHC) complexes serve as the primary targets for CD8+ and CD4+ T cells, which recognize them via specific T-cell receptors (TCRs) to initiate an antiviral response (Source: Cell, 2020, PMID: 32473127). In therapeutic contexts, these complexes are targeted by multi-peptide vaccines like CoVac-1 and TCR-engineered T-cell therapies designed to provide broad and durable immunity against SARS-CoV-2 variants (Source: Nature Communications, 2022, PMID: 34819517). The specificity of the interaction depends heavily on the patient's HLA genotype, which determines which viral epitopes can be effectively presented. Understanding these targets is essential for developing treatments that bypass antibody-mediated viral escape and provide long-term protection through cellular memory.

Other names
SARS-CoV-2 peptide-MHC complexSARS-CoV-2 epitope-HLA complexSARS-CoV-2 structural protein epitopesSARS-CoV-2 T-cell epitopesSARS-CoV-2 pMHC
02

Mechanism of action

Recognition by T-cell receptors (TCRs) to induce cytotoxic T-lymphocyte (CTL) activity and cytokine production.

03

Biological functions

Antigen presentationImmune responseT-cell activationViral recognitionCell death
04

Disease associations

InfectionCOVID-19
05

Safety considerations

Cross-reactivity with human self-peptides (molecular mimicry)Cytokine release syndrome (CRS)HLA restriction limiting patient eligibilityViral mutational escapeOff-target toxicity
06

Interacting drugs

CoVac-1

5 more in the full profile.

07

Biomarkers

HLA-A*02:01HLA-B*07:02Interferon-gamma (IFN-γ)T-cell receptor (TCR) repertoireELISpot

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