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SCY1-like protein 2 (SCYL2)

Target
SCYL2
Molecular classification
Pseudokinase (lacks some conserved catalytic residues, may have weak or context-dependent kinase activity), Clathrin-associated protein, Component of the AP2-containing clathrin coat, Membrane trafficking regulator
01

Overview

SCY1-like protein 2 (SCYL2) is a pseudokinase that participates in the regulation of clathrin-mediated vesicle trafficking at the plasma membrane, trans-Golgi network, and endosomal system[3][4][6]. Its protein structure includes an N-terminal pseudokinase domain (lacking key catalytic residues), a central HEAT repeat domain for protein-protein interactions, and a coiled-coil domain at the C-terminus[2][3]. It binds both clathrin and adaptor protein complexes and modulates membrane trafficking, including receptor turnover through lysosomal degradation (notably impacting Wnt signaling via Frizzled 5)[3][4]. SCYL2 is essential for proper cell development, neuronal signaling, and organogenesis, with mutations linked to multisystem neurodevelopmental disorders and syndromes such as arthrogryposis multiplex congenita and acute liver failure[1][4]. In cancer, SCYL2 is overexpressed in several tumor types and correlates with poor prognosis, suggesting a role in cell proliferation and migration[2][8]. There are currently no drugs that directly target SCYL2, but reduction of its expression by RNAi techniques impairs proliferation of cancer cells, highlighting its functional importance in cell growth regulation[2][4].

Other names
CVAK104KIAA1360AMC4AMCNACCCoated vesicle-associated kinase of 104 kDaSCY1-like pseudokinase 2SCY1-like 2SCY1-like, kinase-like 2
02

Mechanism of action

Null for direct targeted drugs. For experimental manipulation, RNA interference (shRNA, siRNA) has been used for downregulation in cancer cell models.

03

Biological functions

Regulation of clathrin-mediated membrane trafficking (between plasma membrane, trans-Golgi network, and endosomal system)Secretory protein traffickingPhosphorylation of beta2 subunit of AP2 (putative)Regulation of lysosomal degradation of select plasma membrane receptors (e.g., Frizzled 5, affecting Wnt signaling)Neuronal signaling and brain developmentCell growth and development (shown in animal and plant systems)
04

Disease associations

Neurodevelopmental disorders (e.g., autosomal recessive syndromes with neurodegeneration)Arthrogryposis multiplex congenita (neurogenic types)Cancer (e.g., breast, bladder, colon, liver, and other tumors—increased SCYL2 expression correlates with worse outcome)Acute liver failure (related syndromic forms)Multiple organ development and rare congenital syndromes
05

Safety considerations

Essential for neuronal function and development; reduction/mutation leads to neurodevelopmental and multisystem syndromic diseasesLoss of function may disrupt vesicle trafficking, affecting cellular homeostasis and multiple organ systemsNo direct safety data for drug targeting due to lack of drug interaction data
06

Interacting drugs

None known, as of current searches. Research into clathrin-mediated trafficking or related pathways may yield indirect interactions.
07

Biomarkers

SCYL2 expression level may serve as a prognostic biomarker in several cancers (e.g., breast cancer; elevated levels correlate with poor survival)

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