Target intelligence / Profile preview

SCY1 like pseudokinase 1 (SCYL1)

Target
SCYL1
Molecular classification
Pseudokinase, Kinase-like protein, Intracellular trafficking protein, Transcriptional regulator, Other
01

Overview

SCY1 like pseudokinase 1 (SCYL1) is a highly conserved, ubiquitously expressed protein classified as a pseudokinase due to its divergent N-terminal kinase-like domain, which lacks catalytic activity. SCYL1 contains additional HEAT repeats and a C-terminal coiled-coil domain. It primarily functions as a scaffolding and regulatory protein, localizing to the ER-Golgi intermediate compartment (ERGIC), Golgi apparatus, nucleus, and centrosomes. SCYL1 regulates retrograde trafficking of vesicles between the Golgi and endoplasmic reticulum by interacting with COPI coatomer complexes and Golgi-associated proteins and is involved in maintenance of Golgi morphology. Certain isoforms also participate in transcriptional activation of the telomerase reverse transcriptase and DNA polymerase beta genes. SCYL1 plays important roles in RNA metabolism, nucleocytoplasmic transport of tRNAs, and may regulate REST protein turnover. Pathogenic variants in SCYL1 are associated with neurodegenerative disease (including a mouse model of ALS), spinocerebellar ataxia, and syndromes affecting the liver and peripheral nervous system[1][2][3][5][7]. Currently, there are no known therapeutic drugs targeting SCYL1, and it is not considered a typical drug target or receptor.

Other names
N-terminal kinase-like proteinCVAK90GKLPNTKLTAPKTEIFTRAPHT019P105SCAR21telomerase regulation-associated proteintelomerase transcriptional element-interacting factorteratoma-associated tyrosine kinasecoated vesicle-associated kinase of 90 kDaSCY1-like protein 1
02

Biological functions

Intracellular protein trafficking (especially retrograde Golgi-ER transport)Scaffolding for Golgi-associated proteins and COPI vesicle coat protein complexesTranscriptional regulation (activates transcription of telomerase reverse transcriptase and DNA polymerase beta)Nuclear tRNA exportCentrosome regulation and cell divisionMaintenance of Golgi apparatus morphologyRNA metabolism and nucleocytoplasmic shuttlingRegulation of REST transcription factor turnover
03

Disease associations

Neurodegenerative disease (Amyotrophic lateral sclerosis, ALS, features in knockout mice)Spinocerebellar ataxia, autosomal recessive 21Acute infantile liver failure–cerebellar ataxia–peripheral sensory motor neuropathy syndrome[2][5]Hypophosphatemic rickets[5]Potential broader role in neuron survival and neurodegenerative disorders
04

Safety considerations

Loss of function in animal models leads to severe motor neuron degeneration (features reminiscent of ALS)Deficiency can result in neurogenic muscle atrophy, neuron loss, and cytoplasmic mislocalization of TDP-43 and ubiquilin-2, implicating risk if targeted or disrupted[1]

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