Target intelligence / Profile preview

Septin 9 gene (SEPT9)

Target
SEPT9
Molecular classification
Other (Cytoskeletal GTPase protein; not a receptor, enzyme, transporter, etc.; DNA methylation status is an epigenetic marker, not a direct therapeutic target)
01

Overview

The **Septin 9 gene** encodes a cytoskeletal GTPase involved in cell division, chromosome segregation, and maintaining genomic stability. In a healthy state, the gene helps prevent tumor formation through normal cellular functions including cytokinesis and autophagy[3]. In several cancers, particularly **colorectal cancer (CRC)**, the *SEPT9* gene promoter region becomes hypermethylated. This methylation represses gene expression, disabling its tumor-suppressive roles and contributing to malignant transformation and progression[3][4]. The detection of methylated SEPT9 DNA in plasma is highly specific for CRC, and is FDA-approved as a non-invasive, blood-based biomarker for CRC screening (notably the Epi proColon assay). It is not a classical therapeutic target but is widely used as a **diagnostic and monitoring biomarker** for CRC and as a prognostic marker in other cancers such as hepatocellular carcinoma[5][7]. There are no known direct drug interactions or targeted therapies acting on the methylation status of the SEPT9 gene, and its clinical relevance is as a biomarker rather than a molecular drug target. Note: The “target” in this query is a methylation status (an epigenetic biomarker), not a biological molecule directly targetable by drugs. Thus, it is not a therapeutic target in the traditional sense; instead, it is a clinically validated **biomarker** for colorectal cancer diagnosis, prognosis, and monitoring[3][4][5][6].

Other names
Septin 9SEPT9methylated SEPT9mSEPT9Septin-9
02

Biological functions

Cytoskeletal organizationCell division (mitosis and cytokinesis)Regulation of cell cycleGenomic stabilityAutophagyTumor suppression (through normal expression; methylation inactivates this function)
03

Disease associations

Cancer (primarily colorectal cancer, also described in hepatocellular carcinoma)Oncogenesis (loss of function through promoter methylation)
04

Safety considerations

Limited by moderate sensitivity in asymptomatic populations compared to some fecal-based diagnostic testsFalse positives possible; positive result requires confirmatory colonoscopyNot a substitute for direct diagnosis or for patients eligible for other CRC screening modalitiesInsufficient evidence of utility for non-CRC cancers or for population-wide screening
05

Biomarkers

Biomarker for early detection and monitoring of colorectal cancer (FDA-approved; Epi proColon test)Prognostic biomarker for hepatocellular carcinomaMonitoring minimal residual disease and recurrence in colorectal cancer after surgeryEpigenetic marker (hypermethylation of SEPT9 promoter region)

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