Target intelligence / Profile preview

SET and MYND domain-containing protein 5 (SMYD5)

Target
SMYD5
Molecular classification
Enzyme, Protein-lysine N-methyltransferase, Histone methyltransferase, Ribosomal methyltransferase, Epigenetic regulator
01

Overview

SET and MYND domain-containing protein 5 (SMYD5) is a protein-lysine N-methyltransferase and member of the SMYD family of epigenetic regulators, characterized by a split SET domain and a MYND domain[1][3][4]. SMYD5 primarily functions as a ribosomal methyltransferase, specifically trimethylating lysine 22 on the ribosomal protein RPL40, a modification crucial for efficient translation elongation and global protein synthesis[2][3]. SMYD5 also exhibits histone methyltransferase activity, including trimethylation of histone H3 at lysine 36 (H3K36me3) at gene promoters and possibly H4K20, thereby impacting chromatin structure and transcriptional control[4][1]. SMYD5 regulates stem cell differentiation, maintains genome stability via heterochromatin formation, contributes to silencing transposable elements, and represses pro-inflammatory gene expression in macrophages[1]. Clinically, SMYD5 and its RPL40 methylation activity are upregulated in several cancers, notably hepatocellular carcinoma, where they correlate with poor prognosis and contribute to tumorigenesis; targeting SMYD5 may sensitize tumors to mTOR inhibitors, making it a promising but as yet experimental therapeutic target[2][3][4].

Other names
Protein-lysine N-trimethyltransferase SMYD5RAI15RRG1NN8-4AGZMYND23Protein NN8-4AGRetinoic acid-induced protein 15[histone H3]-lysine20 N-trimethyltransferase SMYD5[histone H4]-lysine36 N-trimethyltransferase SMYD5[histone H3]-lysine36 N-trimethyltransferase SMYD5[histone H4]-lysine20 N-trimethyltransferase SMYD5histone-lysine N-trimethyltransferase SMYD5retinoic acid induced 15retinoic acid responsive
02

Mechanism of action

Inhibition of SMYD5 disrupts RPL40 lysine methylation, reduces translation output, disrupts elongation, and causes increased ribosome collisions, making cells more sensitive to translation pathway inhibitors (notably mTOR pathway inhibitors)[2][3].

03

Biological functions

Protein-lysine N-methyltransferase activityPromotion of translational elongationRegulation of protein synthesisStem cell differentiation and self-renewalTransposable element silencing by heterochromatin formationRegulation of gene expression via histone modificationRepression of inflammatory genes (e.g., TLR4 pathway)Maintenance of genome stability during differentiationRegulation of hypothermia response in neurons
04

Disease associations

Cancer (notably hepatocellular carcinoma)Chronic inflammation (via immune gene regulation)Neuroprotection (hypothermia response)Other (epigenetic dysregulation diseases)
05

Safety considerations

Potential for broad effects on global translation/protein synthesis if inhibited, which may impact normal tissue homeostasis and stem cell function[2][3][1].Possible immune modulation, given role in inflammatory gene repression[1].
06

Interacting drugs

No approved specific SMYD5 inhibitors in clinical use as of 2025; however, *experimental* targeting of SMYD5 (knockdown/knockout) is synergistic with mTOR inhibitors in cancer models[2][3].
07

Biomarkers

SMYD5 expression (mRNA and protein) levels in tumor tissue, especially hepatocellular carcinoma, correlate with disease prognosis[2][3].RPL40 K22 trimethylation (RPL40 K22me3) as a downstream readout of SMYD5 activity[2][3].

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