Target intelligence / Profile preview

SIN3 transcription regulator family member B (SIN3B)

Target
SIN3B
Molecular classification
Transcriptional corepressor, Histone deacetylase complex subunit, Chromatin remodeling scaffold, Transcription factor regulator
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Overview

SIN3 transcription regulator family member B (SIN3B) is a master transcriptional scaffold protein that organizes histone deacetylase (HDAC) complexes, mediating chromatin remodeling and transcriptional repression. It acts by binding, stabilizing, and activating Class I HDACs via direct protein–protein interactions, serving as a core component that enables gene silencing through targeted histone deacetylation, with the complex preferring to deacetylate histone H3 at lysine 27 (H3K27ac), among other sites. SIN3B interacts with various transcription factors and is pivotal in cell fate decisions such as cell cycle exit, senescence, and differentiation. Its loss or dysregulation is implicated in cancer biology—where it can act as a tumor suppressor or promote metastasis depending on context—and in some neurodevelopmental syndromes. As a molecular scaffold and regulator within chromatin remodeling complexes, SIN3B is a key node integrating oncogenic, developmental, and inflammatory signals to control gene expression

Other names
SIN3BPaired amphipathic helix protein Sin3bKIAA0700Histone deacetylase complex subunit Sin3bTranscriptional corepressor Sin3bSIN3 homolog Btranscriptional regulator Sin3bpaired amphipathic helix protein Sin3b
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Mechanism of action

Drugs modulate the activity of the SIN3B-containing histone deacetylase complex, primarily by inhibiting the associated HDAC enzyme (Class I HDACs, especially HDAC1/2) leading to increased acetylation of histones and derepression of gene transcription

03

Biological functions

Transcriptional repressionChromatin remodelingCell cycle regulationCellular senescence regulationCellular differentiationRegulation of cell fate decisionsNegative regulation of transcription by RNA polymerase II
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Disease associations

Cancer (as a context-dependent tumor suppressor or promoter)Neurodevelopmental disorders (e.g., syndromes with intellectual disability and autism)Other roles in cardiac and skeletal muscle development, and possibly inflammation
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Safety considerations

Broad targeting of SIN3B-containing HDAC complexes may disrupt normal gene silencing and differentiation programs, leading to possible side effects such as impaired cell cycle control or dysregulated developmentCancer therapies modulating these complexes risk influencing tumor suppressor and oncogenic functions contextually
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Interacting drugs

Histone deacetylase inhibitors, e.g., Vorinostat (SAHA) (as mechanistic probes and potential therapeutic interventions against the complex, not SIN3B alone)
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Biomarkers

H3K27 acetylation (H3K27ac) as a marker of SIN3B/HDAC target sites and activityExpression of SIN3B may act as a biomarker in some cancers and neurodevelopmental disorders, though these are context-specific and not broadly clinically validated

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