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Small Cajal body-specific RNA 4 (SCARNA4)

Target
SCARNA4
Molecular classification
Other (non-coding RNA), Small nucleolar RNA (snoRNA), H/ACA box snoRNA, Small Cajal body-specific RNA (scaRNA)
01

Overview

Small Cajal body-specific RNA 4 (SCARNA4, also called ACA26) is a non-coding RNA of the H/ACA box snoRNA class that is specifically localized in the Cajal bodies within the cell nucleus. SCARNA4 functions as a guide RNA for the pseudouridylation (conversion of uridine to pseudouridine) of specific uridines (notably U39 and U41) in the U2 spliceosomal small nuclear RNA (snRNA), a key component of the major spliceosome machinery. This modification is important for proper snRNA maturation and efficient pre-mRNA splicing. Like other scaRNAs, SCARNA4 is essential for RNA processing but is not itself a protein-coding gene, nor is it a typical druggable therapeutic target. Emerging evidence links SCARNA4 expression and its small RNA derivatives to cancer biology and immune modulation, supporting utility as a potential biomarker in research, but direct targeting by medical drugs is not established.

Other names
ACA26small Cajal body specific RNA 4
02

Biological functions

Guide RNA for post-transcriptional modification (pseudouridylation) of spliceosomal snRNAs (notably U2 snRNA)RNA biogenesis and maturation through modification of RNA polymerase II transcribed small nuclear RNAs (U1, U2, U4, U5, U12)Potential modulation of immune response via small RNA derivatives
03

Disease associations

Reported downregulation in congenital heart disease (tetralogy of Fallot)Role in cancer: small RNA derivatives used as markers for cancer immunity and clinical outcomesInvolved in core gene expression changes in lung tissue from pulmonary arterial hypertension patients
04

Biomarkers

Small RNA derivatives from SCARNA4 as candidate biomarkers in several cancers (prognostic value for cancer immunity and clinical outcome)

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