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Spike glycoprotein of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) (S-protein)

Target
S-protein
Molecular classification
Viral fusion protein (Class I), Viral membrane protein, Homotrimeric glycoprotein, Surface protein
01

Overview

The SARS-CoV-2 spike glycoprotein is a large, homotrimeric transmembrane protein expressed on the surface of the virus, mediating viral entry into host cells by binding to the angiotensin-converting enzyme 2 (ACE2) receptor and driving fusion of the viral and cellular membranes[1][3][7]. Each monomer consists of 1,273 amino acid residues in the original Wuhan-Hu-1 strain[1][5][7]. The protein is composed of S1 and S2 subunits: S1 contains the receptor-binding domain (RBD) responsible for ACE2 recognition, while S2 mediates membrane fusion[1][3][7]. The trimeric spike protrudes from the viral surface, giving the coronavirus its characteristic "crown-like" appearance[1][7]. The spike protein is highly immunogenic and serves as the primary target for vaccine development and antibody therapeutics[3][6]. It is extensively glycosylated and undergoes significant conformational changes upon receptor engagement and host cell entry[3][6]. Mutations in the spike protein are linked to viral evolution, altered transmissibility, and immune escape in emerging variants[3][8].

Other names
Spike proteinS glycoproteinSpike (S) proteinS proteinE2 (historical nomenclature)Coronavirus spike proteinSARS-CoV-2 spike
02

Mechanism of action

Antibodies: Block receptor-binding domain (RBD), inhibit S-protein binding to ACE2, neutralize virus entry[1][3][6][7]; Vaccines: Induce neutralizing antibodies against spike antigen, stimulate T-cell responses[1][3][5][6]; Protease inhibitors: Block S-protein priming/fusion activation; Entry inhibitors: Prevent S-protein structural rearrangement or fusion with host cell[6][7]

03

Biological functions

Mediate viral entry into host cells[1][6][7]Receptor recognition and binding (ACE2 receptor)[1][3][7]Facilitate membrane fusion (virus-cell fusion)[1][2][3][7]Determine host range and cell tropism[1]Activate host immune response (antigenicity)[3][5]Induce antibody production (target of neutralizing antibodies)[1][3][5]Participate in viral pathogenesis[9]
04

Disease associations

Infection (COVID-19, SARS-CoV-2)[1][3][7]Pathogenesis of viral diseases[3][7]Pandemic disease agent[1][3]
05

Safety considerations

Mutational escape (variants may evade drug or vaccine-induced immunity)[3][8]Vaccine reactogenicity (allergic reactions to spike antigen components)Antibody-dependent enhancement (hypothetical, not clearly documented for SARS-CoV-2 Spike)[6]Selection of resistant viral variants under therapeutic pressure[3][8]Risk of exaggerated immune responses (cytokine storm, rare)[6]
06

Interacting drugs

Monoclonal antibodies (e.g., casirivimab, imdevimab, sotrovimab, tixagevimab, cilgavimab)[6]

4 more in the full profile.

07

Biomarkers

Anti-spike IgG/IgM titers (serology for past infection or vaccine response)[1][3][5]Neutralizing antibody titers (vaccine efficacy, convalescent plasma)Viral RNA with spike gene mutations (diagnostic, variant tracking)

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