Target intelligence / Profile preview

Splicing regulator

Molecular classification
RNA-binding protein, Enzyme, Other
01

Overview

Splicing regulators are a diverse group of proteins and ribonucleoprotein complexes, including SR proteins, hnRNPs, and the spliceosome itself, that orchestrate the removal of introns and the joining of exons in pre-mRNA [1, 3]. This process, known as alternative splicing, allows a single gene to produce multiple protein isoforms, significantly expanding the functional diversity of the proteome [2, 8]. Dysregulation of splicing regulators, often through mutations or expression changes, is a hallmark of various diseases, particularly cancers like myelodysplastic syndromes and rare genetic disorders like spinal muscular atrophy [3, 9]. Therapeutic strategies targeting these regulators include small-molecule inhibitors of the spliceosome, molecular glues that induce the degradation of specific splicing factors, and splicing modifiers that correct aberrant splicing events in specific transcripts [4, 5, 7]. While promising, targeting the core splicing machinery often faces challenges related to systemic toxicity due to the essential nature of splicing in all cells [1, 5].

Other names
Splicing factorRNA-binding protein (RBP)Splicing modifier targetSpliceosome componentAlternative splicing regulator
02

Mechanism of action

Splicing regulators are targeted by small molecules or antisense oligonucleotides to modulate the inclusion or exclusion of specific exons in pre-mRNA. This is achieved through direct inhibition of the spliceosome (e.g., SF3B1 inhibitors), molecular glue-induced degradation of specific splicing factors (e.g., RBM39 degraders), or splicing modifiers that stabilize the interaction between the spliceosome and specific pre-mRNA sequences (e.g., SMN2 splicing modifiers).

03

Biological functions

RNA splicingAlternative splicingmRNA processingGene expression regulation
04

Disease associations

CancerSpinal muscular atrophyMyelodysplastic syndromeRetinitis pigmentosaNeurodegenerative disease
05

Safety considerations

Global splicing inhibition leading to systemic toxicityOff-target effects on essential genesHematological toxicity (e.g., neutropenia)Gastrointestinal issuesPotential for widespread transcriptomic instability
06

Interacting drugs

Risdiplam

7 more in the full profile.

07

Biomarkers

SF3B1 mutation statusRBM39 expression levelsSMN2 copy numberAlternative splicing isoforms (e.g., inclusion of cryptic exons)U2AF1 mutation status

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