Target intelligence / Profile preview

Trans-translation machinery

Molecular classification
Ribonucleoprotein complex, Ribosomal protein, Other
01

Overview

The trans-translation machinery in Mycobacterium tuberculosis is a specialized ribosome rescue system consisting of transfer-messenger RNA (tmRNA) and Small protein B (SmpB) (Keiler, 2015, Nature Reviews Microbiology). This pathway is crucial for the survival of M. tuberculosis within the hostile, acidic, and energy-stressed environment of host macrophages, where it prevents the accumulation of stalled ribosomes on damaged or truncated mRNAs (Shi et al., 2011, Science; Personne & Parish, 2014, Journal of Bacteriology). By facilitating the release of these ribosomes and tagging the resulting incomplete proteins for proteolysis, the system ensures the recycling of translational components and maintains cellular proteostasis. The importance of this pathway is highlighted by the mechanism of the first-line drug pyrazinamide, which, in its active form pyrazinoic acid, binds to ribosomal protein S1 (RpsA) to inhibit trans-translation (Shi et al., 2011). Because this rescue mechanism is unique to bacteria and absent in humans, it serves as an attractive target for novel antibiotic development. Recent research has identified several experimental compounds, such as MBX-4132 and KKL-1005, that specifically inhibit this process to kill both actively growing and persistent mycobacteria (Varshney et al., 2025, ACS Infectious Diseases; Alumasa et al., 2017, Antimicrobial Agents and Chemotherapy).

Other names
tmRNA-SmpB systemRibosome rescue pathwaySsrA-SmpB complexRibosomal protein S1 (RpsA)30S ribosomal protein S1Ribosomal protein bL12
02

Mechanism of action

Inhibition of the trans-translation ribosome rescue pathway by binding to essential components such as ribosomal protein S1 (RpsA) or bL12, which prevents the rescue of stalled ribosomes and leads to the accumulation of toxic truncated proteins and depletion of the active ribosome pool.

03

Biological functions

Ribosome rescueProtein quality controlStress responseTranslation regulationBacterial persistence
04

Disease associations

Infection
05

Safety considerations

Development of drug resistance through mutations in pncA or rpsAPotential for off-target effects on mitochondrial translation (theoretical)pH-dependent activity of certain inhibitors like pyrazinamide
06

Interacting drugs

Pyrazinamide

4 more in the full profile.

07

Biomarkers

SsrA-tagged protein levelstmRNA (ssrA) expression levelspncA gene mutationsrpsA gene mutations

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