Target intelligence / Profile preview

U6 snRNA biogenesis phosphodiesterase 1 (USB1)

Target
USB1
Molecular classification
Enzyme (specifically 3'-5' RNA exonuclease), Phosphodiesterase, Member of the 2H phosphodiesterase superfamily
01

Overview

U6 snRNA biogenesis phosphodiesterase 1 (USB1) is an **RNA exonuclease** enzyme essential for the processing of the 3′ end of U6 small nuclear RNA (snRNA), a central component of the spliceosome responsible for pre-mRNA splicing. USB1 trims the 3’ end of pre-U6 snRNA transcripts and generates a 2',3'-cyclic phosphate, which is important for snRNP (small nuclear ribonucleoprotein) biogenesis and for the stability and function of U6 snRNA in the spliceosome[1][3][5]. In humans, USB1 also acts on U6atac snRNA, another component of minor spliceosomes. Mutations in USB1 lead to the rare genetic disease *poikiloderma with neutropenia* (PN), typified by skin abnormalities and chronic neutropenia, due to impaired function in blood cell and skin development[1][5]. USB1 is a member of the conserved 2H phosphodiesterase superfamily, is specific for snRNA substrates (notably U6), and is essential for proper RNA processing and spliceosome assembly[3]. No drugs are currently known to target USB1 directly, nor are there established safety concerns outside of genetic inheritance and congenital syndromes. The enzyme does not appear to be a therapeutic drug target in current clinical development.

Other names
C16orf57Mpn1hUsb1Mutated in PN protein 1hMpn1FLJ13154HVSL1PNU6 snRNA phosphodiesterase 13'-5' RNA exonuclease USB1Mutated in poikiloderma with neutropenia protein 1HVSL motif containing 1U six biogenesis 1UPF0406 protein C16orf57
02

Mechanism of action

Not applicable, as no approved or experimental drugs directly target USB1

03

Biological functions

U6 snRNA processing (3' end modification)Spliceosome assembly and functionRNA stabilization and protectionMessenger RNA (mRNA) splicingMaturation of neutrophils
04

Disease associations

Poikiloderma with neutropenia (a rare congenital disorder)Potential roles in DNA repair and telomere maintenance are suggested in related syndromes
05

Safety considerations

Loss-of-function mutations cause impaired neutrophil development and skin abnormalities (poikiloderma with neutropenia)Not known to be drugged therapeutically, so classic drug off-target or toxicity issues are not described in the literature
06

Interacting drugs

None currently known in clinical use or described in the literature as targeting USB1 directly
07

Biomarkers

Mutations in USB1 may serve as biomarkers for poikiloderma with neutropenia and related syndromes

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