Target intelligence / Profile preview

Ubiquitin protein ligase E3A antisense RNA (UBE3A-ATS) (UBE3A-ATS)

Target
UBE3A-ATS
Molecular classification
Long non-coding RNA, Antisense RNA
01

Overview

The Ubiquitin protein ligase E3A antisense RNA (UBE3A-ATS) is a long non-coding RNA (lncRNA) that mediates the neuron-specific epigenetic silencing of the paternal UBE3A allele (PubMed: 25339411). In healthy neurons, UBE3A-ATS is expressed from the paternal chromosome and prevents the expression of the paternal UBE3A gene through transcriptional interference, leaving the maternal allele as the sole source of UBE3A protein. Angelman Syndrome is a neurodevelopmental disorder caused by the loss of function of the maternal UBE3A allele, which results in a deficiency of the UBE3A protein in the brain because the paternal copy remains silenced by UBE3A-ATS (NIH: NBK1144). UBE3A-ATS has emerged as a primary therapeutic target; by using antisense oligonucleotides (ASOs) to degrade this transcript, researchers can unsilence the paternal UBE3A gene and restore protein levels (Nature: 10.1038/nature13975). Several investigational therapies, including GTX-102 and Rugonersen, are currently in clinical development to evaluate this mechanism's ability to improve motor, speech, and cognitive symptoms in patients (ClinicalTrials.gov: NCT04259281).

Other names
UBE3A-ASUBE3A antisense transcriptSNHG14UBE3A-AS1LNC-UBE3A-ATS
02

Mechanism of action

Antisense oligonucleotide-mediated degradation of the UBE3A-ATS transcript to reactivate the silenced paternal UBE3A allele.

03

Biological functions

Genomic imprintingGene silencingTranscriptional interferenceEpigenetic regulation
04

Disease associations

Angelman Syndrome
05

Safety considerations

Lower extremity weakness and arachnoiditis (observed in high-dose ASO clinical trials)Potential for UBE3A overexpression leading to a Dup15q syndrome-like phenotypeInflammatory response to intrathecal administrationOff-target RNA degradation
06

Interacting drugs

GTX-102

2 more in the full profile.

07

Biomarkers

Cerebrospinal fluid UBE3A protein levelsQuantitative EEG delta powerClinical Global Impression-Improvement (CGI-I)Bayley Scales of Infant and Toddler Development (BSID)

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