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Ubiquitin-specific peptidase 47 (USP47)

Target
USP47
Molecular classification
Enzyme (cysteine-type deubiquitinase), Ubiquitin-specific protease (USP family)
01

Overview

Ubiquitin-specific peptidase 47 (USP47) is a cysteine protease within the USP family, structurally related to USP7 and USP40[1]. It catalyzes removal of ubiquitin from Lys48- and Lys63-linked polyubiquitin chains, thereby regulating protein stability, signaling, and cellular homeostasis. USP47 is widely expressed, with highest abundance in the brain, liver, and kidneys, and localizes to cytoplasmic vesicles and intermediate filaments[1]. Biologically, USP47 stabilizes key proteins involved in axonal growth (katanin), cell adhesion (E-cadherin), EMT, and DNA repair (Pol β)[1][2]. It regulates signaling pathways (Hippo, p53, NF-κB, Wnt, and others) and is upregulated in many cancers, contributing to tumor development, metastasis, and resistance to therapy. Inhibition of USP47 can suppress cancer cell growth, reverse EMT, and impair DNA repair, making it a promising therapeutic target[1][3]. USP47 also participates in modulating immune responses by regulating inflammasome assembly and pro-inflammatory cytokine release, as well as maintaining genome integrity and neuronal development[2]. Therapeutic inhibition—e.g., with P22077—is in preclinical development and shows efficacy against drug-resistant leukemias and solid tumors[1]. USP47’s regulatory versatility makes it central to cancer biology, immunity, and neural function, though risks of off-target effects and safety concerns remain to be explored.

Other names
USP47Ubiquitin specific protease 47Ubiquitin carboxyl-terminal hydrolase 47
02

Mechanism of action

Inhibition of USP47 activity leads to reversal of malignant tumor behavior, increased apoptosis, impaired DNA repair, and reduced EMT and cell proliferation Targeting USP47 can sensitize tumors to chemotherapy/targeted therapy by eradicating drug-resistant cells and cancer stem/progenitor cells USP47 inhibitors impair NLRP3 inflammasome activation, reducing inflammatory cytokine release

03

Biological functions

Deubiquitination (removes ubiquitin from substrate proteins)DNA damage repair (stabilizes DNA polymerase β)Axonal growth and neuronal development (stabilizes katanin)Cell adhesion (stabilizes E-cadherin)Epithelial-mesenchymal transition (EMT) regulation (deubiquitinates and stabilizes Snail and E-cadherin)Regulation of cell proliferation, apoptosis, and cell migration (modulates Hippo, p53, and other oncogenic pathways)Innate and adaptive immunity (modulates inflammasome, NF-κB, and interferon signaling)
04

Disease associations

Cancer (involved in tumorigenesis, metastasis, drug resistance, especially colorectal cancer, leukemia, and lung cancers)Inflammation (regulates NF-κB and inflammasome pathways)Neurodegenerative disease and neuronal developmentCardiovascular disease (role in myocardial infarction)
05

Safety considerations

Potential on-target toxicity in normal tissues (expression in multiple organs)Risk of impaired DNA repair and genomic instabilityUncharted effects on immune homeostasis (given roles in innate immunity and inflammasome regulation)
06

Interacting drugs

P22077 (USP47/USP7 inhibitor; experimental)
07

Biomarkers

USP47 expression (tumor tissue and blood levels correlate with cancer progression and drug resistance)miRNAs regulating USP47 (e.g., miR-204-5p, miR-188-5p, miR-199b, miR-101-3p, miR-454)

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