Target intelligence / Profile preview

Yip1 domain family member 6 (YIPF6)

Target
YIPF6
Molecular classification
Transmembrane protein, Cargo receptor (functions in vesicular trafficking), Member of the Yip domain family, Localized in Golgi and ER membranes
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Overview

Yip1 domain family member 6 (YIPF6) is a transmembrane protein found in the ER and Golgi apparatus, with five membrane-spanning domains and a cytoplasmic N-terminal domain. YIPF6 forms complexes with other YIPF proteins (YIPF1, YIPF2) for Golgi function and glycan synthesis, and is essential for the normal secretion of select cargo proteins, notably fibroblast growth factor 21 (FGF21), by acting as a cargo receptor that facilitates FGF21 sorting into COPII vesicles. In mouse models, YIPF6 mutations cause spontaneous intestinal inflammation and sensitivity to colitis, and in the liver, loss of YIPF6 leads to increased FGF21 secretion, protecting against diet-induced obesity and hepatic steatosis. YIPF6 therefore plays a critical role in membrane trafficking, protein secretion, and metabolic and inflammatory disease, making it a candidate therapeutic target in these contexts.

Other names
Protein YIPF6MGC21416FinGER6Yip4YIPFalpha3YIP1 family member 6
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Mechanism of action

YIPF6 acts as a cargo receptor for the packaging and selective secretion of FGF21 via COPII vesicles; modulation of its function could indirectly affect FGF21 levels, an established therapeutic axis in metabolic diseases

03

Biological functions

Regulates ER-to-Golgi vesicle-mediated transport, particularly in the packaging and secretion of select cargo proteinsMaintains Golgi apparatus stability and reassemblySupports normal glycan synthesisFunctions in secretion in gastrointestinal epithelial cellsSorts and regulates secretion of Fibroblast growth factor 21 (FGF21)
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Disease associations

Inflammation: YIPF6 mutations cause heightened sensitivity to colitis in mice and altered Paneth/goblet cell function, suggesting a role in intestinal inflammation and possibly human inflammatory bowel disease (IBD)Metabolic disease: Regulates FGF21 secretion in liver, impacting obesity, hepatic steatosis, and insulin resistance in mouse models. Human YIPF6 levels correlate with liver disease and NAFLDOther: Associated with maintenance of intestinal homeostasis
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Safety considerations

YIPF6 mutations lead to impaired vesicular transport and secretion, with resulting defects in intestinal function and an increased risk of inflammationTherapeutic modulation could impact protein sorting and basic cellular homeostasis
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Interacting drugs

No drugs directly targeting YIPF6 have been described in the literature as of September 2025
07

Biomarkers

YIPF6 expression in liver correlates with hepatic steatosis and inversely with serum FGF21 in NAFLD patients, implying utility as a biomarker for metabolic disease and possibly IBD

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