Target intelligence / Profile preview

Zinc-ion dependent enzyme

Molecular classification
Enzyme, Metalloenzyme, Hydrolase, Oxidoreductase, Transferase, Structural protein
01

Overview

Zinc-ion dependent enzymes are molecular catalysts that require a zinc ion (Zn²⁺) in their active or structural site for function. Zinc may participate directly in catalysis (e.g., hydrolyzing peptide bonds in metalloproteinases), stabilize the active site, or regulate enzyme activity allosterically. The zinc atom typically coordinates with amino acid side chains (commonly histidine, cysteine, glutamate/aspartate) in a tetrahedral, trigonal bipyramidal, or octahedral geometry, which greatly influences catalytic efficiency and substrate specificity. Zinc-dependent enzymes are critical for processes ranging from metabolism (alcohol dehydrogenase, carbonic anhydrase), gene regulation (zinc finger proteins), to extracellular matrix remodeling (matrix metalloproteinases). Dysfunction or dysregulation of these enzymes underlies numerous disease states, and many are validated drug targets. For structured database use, it is essential to specify a particular enzyme (e.g., "Matrix metalloproteinase-3," "Angiotensin-converting enzyme") rather than the generic "Zinc-ion dependent enzyme."

Other names
zinc metalloenzymezinc-dependent enzymeZn²⁺ enzyme
02

Mechanism of action

Competitive inhibition at the zinc-binding active site Chelation of the zinc ion, blocking enzymatic function Allosteric inhibition altering zinc binding geometry

03

Biological functions

Catalysis (hydrolysis, oxidation–reduction, transfer reactions)Protein structural stabilizationCellular signalingRegulation of transcription (e.g., via zinc finger proteins)Protein–protein interaction stabilization
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Disease associations

CancerInflammationNeurodegenerative diseaseCardiovascular diseaseInfectionOther (many roles depending on enzyme)
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Safety considerations

Off-target inhibition of essential zinc enzymes, leading to toxicityHomeostatic disturbance of systemic zinc (can affect multiple organ systems)Potential for broad side effects due to widespread zinc enzyme presence
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Interacting drugs

Angiotensin-converting enzyme inhibitors (e.g., captopril targets ACE)

3 more in the full profile.

07

Biomarkers

Enzymatic activity in serum/plasma (e.g., ACE, MMP levels)Zinc levels (serum or tissue)Levels of zinc transporter proteins (ZIP, ZnT family)

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